Over recent years there has been an increasing number of treatmen

Over recent years there has been an increasing number of treatment options available for patients with HCC that prolong life, including liver transplantation as a curative option in selected patients [56]. Screening programmes utilizing serum alpha-feto protein (AFP) measurements together with 6-monthly ultrasound scans (USSs) have been demonstrated to improve survival in non-HIV-infected patients [57]. Although AFP may not add to the value of USSs if done

twice or more a year, this screening frequency signaling pathway is often impractical within resources and therefore AFP still has a place. Surveillance for HCC needs to be tailored to specific risk. BGJ398 in vitro Some patients may warrant more intensive surveillance with shorter frequency or different modality (such as CT or MRI). Since the advent of HAART, a number

of transplant programmes have evaluated liver transplantation in HIV-infected patients. HIV infection is no longer considered a contraindication to liver transplantation and a number of guidelines, including BHIVA guidelines, are now in existence [58,59]. The overall success of liver transplantation in this setting has been adequately demonstrated in a number of recent reports [60–65] showing comparable short- and medium-term graft and patient survival to that for non-HIV recipients. There are, however, reports of aggressive HCV recurrence and shorter post-transplant survival in HIV/HCV coinfected patients [62,65–67]. The use and success of post-transplant anti-HCV therapy in this context are currently under evaluation. Cytidine deaminase What is also not clear is the optimal timing of transplantation in this group of patients. Recent data from a multicentre study suggest increased mortality on transplant waiting lists of HIV-positive patients compared with HIV-negative patients [68]. An important factor in

this regard may be late referral for transplantation, as evidenced by higher Model for End-Stage Liver Disease (MELD) scores at referral, in addition to a faster kinetic of decline. It is therefore imperative that HIV-positive patients with a diagnosis of ESLD are co-managed by hepatologists who have links with transplant units, and are referred early for consideration and assessment for liver transplantation. This should occur no later than after their first decompensation. Accurate disease staging is crucial for all patients with HBV and HCV coinfections for the early identification of cirrhosis (II). There should be close liaison with the local hepatology team (gastroenterologist specializing in hepatology or hepatologist) and a virologist, and established contacts with the regional transplant centre.

Over recent years there has been an increasing number of treatmen

Over recent years there has been an increasing number of treatment options available for patients with HCC that prolong life, including liver transplantation as a curative option in selected patients [56]. Screening programmes utilizing serum alpha-feto protein (AFP) measurements together with 6-monthly ultrasound scans (USSs) have been demonstrated to improve survival in non-HIV-infected patients [57]. Although AFP may not add to the value of USSs if done

twice or more a year, this screening frequency selleck inhibitor is often impractical within resources and therefore AFP still has a place. Surveillance for HCC needs to be tailored to specific risk. Selleckchem NVP-BEZ235 Some patients may warrant more intensive surveillance with shorter frequency or different modality (such as CT or MRI). Since the advent of HAART, a number

of transplant programmes have evaluated liver transplantation in HIV-infected patients. HIV infection is no longer considered a contraindication to liver transplantation and a number of guidelines, including BHIVA guidelines, are now in existence [58,59]. The overall success of liver transplantation in this setting has been adequately demonstrated in a number of recent reports [60–65] showing comparable short- and medium-term graft and patient survival to that for non-HIV recipients. There are, however, reports of aggressive HCV recurrence and shorter post-transplant survival in HIV/HCV coinfected patients [62,65–67]. The use and success of post-transplant anti-HCV therapy in this context are currently under evaluation. acetylcholine What is also not clear is the optimal timing of transplantation in this group of patients. Recent data from a multicentre study suggest increased mortality on transplant waiting lists of HIV-positive patients compared with HIV-negative patients [68]. An important factor in

this regard may be late referral for transplantation, as evidenced by higher Model for End-Stage Liver Disease (MELD) scores at referral, in addition to a faster kinetic of decline. It is therefore imperative that HIV-positive patients with a diagnosis of ESLD are co-managed by hepatologists who have links with transplant units, and are referred early for consideration and assessment for liver transplantation. This should occur no later than after their first decompensation. Accurate disease staging is crucial for all patients with HBV and HCV coinfections for the early identification of cirrhosis (II). There should be close liaison with the local hepatology team (gastroenterologist specializing in hepatology or hepatologist) and a virologist, and established contacts with the regional transplant centre.

57, adjusted, P<0001): Culture supernatants from growth at 8, 15

57, adjusted, P<0.001): Culture supernatants from growth at 8, 15 and 37 °C were analysed in a Vero cell cytotoxicity assay (Table 1). The initially observed feature was the full cytotoxicity shared by both bacterial species after culturing at 15 °C. At 8 °C, two of the four B. weihenstephanensis strains showed high cytotoxicity, while the other two were negative or very low. After growth at 37 °C, no cytotoxic activity was seen from the four B. weihenstephanensis strains, while two of three B. cereus strains were Quizartinib clinical trial highly cytotoxic (80–100% range) and one strain (B. cereus NVH 1230-88)

was low (in the 20–50% range). The production of adequate levels of three-component protein cytotoxins Nhe and/or Hbl results in cytotoxicity in the Vero cell assay (Lund & Granum, 1996; Prüss et al., 1999; Dietrich et al., 2005). Components of those toxins were sought in the tested bacterial culture supernatants using commercially available antibody-based kits (Table 2). The L2 component of Hbl was detected at all three temperatures in all strains, except in Selleck Napabucasin B. cereus strain NVH 0075-95, which does not contain the operon encoding Hbl (Granum et al., 1996). On the other hand, the Nhe component NheA was detected

in all strains after growth at 15 °C, while when grown at 37 °C, NheA was only found in one of the four B. weihenstephanensis strains. One B. weihenstephanensis strain did not produce NheA at 8 °C. The boar spermatozoa assay was used to screen the Bacillus spp. strains for the production of cereulide (emetic B. cereus toxin) under standard conditions. Only one of the seven Bacillus strains (a B. cereus strain, NVH 1230-88) was weakly positive in this assay (results not

shown). However, screening by PCR for the genes encoding cereulide was negative for all the strains (results not shown). In vivo virulence results from experiments performed on G. mellonella larvae with the seven bacterial strains are presented in Fig. 1, which shows kinetics of induced mortality through the observation period following larval infection by two routes and at both temperatures. In order to give a general picture of virulence and because the exact dose repeats Non-specific serine/threonine protein kinase were not possible to obtain, larval mortalities are shown as raw data, and B. cereus and B. weihenstephanensis strains are each grouped together. The results reveal variation in virulence level among strains (individual strain results not shown), even in the same group, but differences are particularly marked for mortality speed related to temperature between B. cereus and B. weihenstephanensis. Thus, using our linear regression model for in vivo experimental data, a significant difference was found in virulence between B. weihenstephanensis and B. cereus species (P<0.001), observed mainly at 37 °C (Fig. 1). Indeed, the psychrotolerant strains mostly showed negligible virulence both 24 and 90 h after infection, while B. cereus strains were generally highly virulent at 37 °C.

, 1995) From

, 1995). From Selleckchem NVP-AUY922 a public health point of view, the most important aflatoxin producers are indubitably A. flavus and A. parasiticus (Pildain et al., 2008), which are widely distributed, as well as the aflatoxigenic A. nomius (Samson et al., 2000). Five new species of the section Flavi were tested with our strategy (A. arachidicola, A. bombycis, A. minisclerotigenes, A. pseudotamarii and A. parvisclerotigenus). Four of them were discriminated, but one species, A. parvisclerotigenus, could not be distinguished

from A. flavus. However, A. parvisclerotigenus is also an aflatoxin-producing species and therefore represents a risk in terms of public health. Therefore, its detection simultaneously with A. flavus, also an aflatoxin producer, does not involve any economic or health issues for strategy users. We do not question the descriptions of the five new species, but it must be noted that these species are much less important economically as well as in terms of public health, some are not found in foodstuffs in large numbers (A. pseudotamarii), or at all (A. bombycis), and some are rarely isolated (A. arachidicola), or are considered up to recently to be a variant of A. flavus (A.

Ulixertinib price parvisclerotigenus) or included in A. flavus group II (A. minisclerotigenes). In conclusion, the molecular strategy presented, based mainly on real-time PCR, is rapid and requires minimal handling, in contrast to conventional morphological methods or conventional PCR methods. Furthermore, RAPD and SmaI digestion allows an accurate identification of Aspergillus section Flavi species, in particular, to address toxigenic problems in the food fermentation industry. This work was supported by funding from the The European Space Agency (ESA), which is gratefully acknowledged. We

thank Mélanie Gourgue for excellent technical assistance. We are grateful to the Mycothèque de l’Université catholique de Louvain [BCCM™/MUCL financial support from the Belgian Federal Science Policy Office (contracts BCCM C2/10/007 and C3/10/003)] for scientific support. MUCL is part of the Belgian Coordinated Collections of Micro-organisms (BCCM™). “
“The appendices can be found on the BHIVA website (http://www.bhiva.org/TreatmentofHIV1_2012.aspx) Thymidine kinase Appendix 1 Summary modified GRADE system Appendix 2 Literature search A2.1 Questions and PICO criteria A2.2 Search protocols Appendix 3 GRADE tables A3.1 Choice of nucleoside reverse transcriptase inhibitor backbone A3.2 Choice of third agent A3.3 Protease inhibitor monotherapy Appendix 4 BHIVA Treatment Guideline update 2013 “
“The fungus Fusarium solani (Mart.) Saccardo (1881) was found to be the cause of infections in the eggs of the sea turtle species Caretta caretta in Boavista Island, Cape Verde. Egg shells with early and severe symptoms of infection, as well as diseased embryos were sampled from infected nests. Twenty-five isolates with similar morphological characteristics were obtained.

, 1995) From

, 1995). From check details a public health point of view, the most important aflatoxin producers are indubitably A. flavus and A. parasiticus (Pildain et al., 2008), which are widely distributed, as well as the aflatoxigenic A. nomius (Samson et al., 2000). Five new species of the section Flavi were tested with our strategy (A. arachidicola, A. bombycis, A. minisclerotigenes, A. pseudotamarii and A. parvisclerotigenus). Four of them were discriminated, but one species, A. parvisclerotigenus, could not be distinguished

from A. flavus. However, A. parvisclerotigenus is also an aflatoxin-producing species and therefore represents a risk in terms of public health. Therefore, its detection simultaneously with A. flavus, also an aflatoxin producer, does not involve any economic or health issues for strategy users. We do not question the descriptions of the five new species, but it must be noted that these species are much less important economically as well as in terms of public health, some are not found in foodstuffs in large numbers (A. pseudotamarii), or at all (A. bombycis), and some are rarely isolated (A. arachidicola), or are considered up to recently to be a variant of A. flavus (A.

Tipifarnib nmr parvisclerotigenus) or included in A. flavus group II (A. minisclerotigenes). In conclusion, the molecular strategy presented, based mainly on real-time PCR, is rapid and requires minimal handling, in contrast to conventional morphological methods or conventional PCR methods. Furthermore, RAPD and SmaI digestion allows an accurate identification of Aspergillus section Flavi species, in particular, to address toxigenic problems in the food fermentation industry. This work was supported by funding from the The European Space Agency (ESA), which is gratefully acknowledged. We

thank Mélanie Gourgue for excellent technical assistance. We are grateful to the Mycothèque de l’Université catholique de Louvain [BCCM™/MUCL financial support from the Belgian Federal Science Policy Office (contracts BCCM C2/10/007 and C3/10/003)] for scientific support. MUCL is part of the Belgian Coordinated Collections of Micro-organisms (BCCM™). “
“The appendices can be found on the BHIVA website (http://www.bhiva.org/TreatmentofHIV1_2012.aspx) Montelukast Sodium Appendix 1 Summary modified GRADE system Appendix 2 Literature search A2.1 Questions and PICO criteria A2.2 Search protocols Appendix 3 GRADE tables A3.1 Choice of nucleoside reverse transcriptase inhibitor backbone A3.2 Choice of third agent A3.3 Protease inhibitor monotherapy Appendix 4 BHIVA Treatment Guideline update 2013 “
“The fungus Fusarium solani (Mart.) Saccardo (1881) was found to be the cause of infections in the eggs of the sea turtle species Caretta caretta in Boavista Island, Cape Verde. Egg shells with early and severe symptoms of infection, as well as diseased embryos were sampled from infected nests. Twenty-five isolates with similar morphological characteristics were obtained.

We believe that in our case the timely association between exposu

We believe that in our case the timely association between exposure to different pyrethroids and onset of symptoms of inflammation on multiple occasions strongly suggests that what happened on that plane was a severe multi-system allergic reaction, or anaphylactic reaction HIF-1 activation to pyrethroids.

Whereas measures to prevent the dissemination of vector-borne illnesses around the globe are necessary, this case introduces a possible downside to this public health approach: flight cabin pyrethroid spraying can provoke life-threatening allergic reactions, at least in one individual, maybe unrecognized in others. Mechanical alternatives to insecticide spraying like “air curtains” should be implemented if proven effective. In the meantime passengers and crew should be notified in advance if, how, and when they might get exposed to insecticides during their flight. Telling people that these insecticides can provoke allergic reactions will allow them to choose to protect themselves. It should be possible

to avoid most of the pyrethroid exposure through inhalation after in-flight spraying (like the blocks-away method) since a 2004 study by Berger-Preiss and colleagues determined that more than 90% of the total amount inhaled insecticides was within the first 5 to 10 minutes following spraying.10 One of the airlines we contacted already tells their passengers prior to spraying that they can cover their eyes and nose if they wish to. Based on the findings from Berger-Preiss and colleagues, we will

also advise our patient to use a face mask during the first 15 minutes following the www.selleckchem.com/products/jq1.html spraying. Finally, we believe it might be useful if cabin crew received a formal training in how to recognize and manage allergic reactions to insecticides. Asthma can be countered with bronchodilatating agents like albutarol and for life-threatening allergic reactions epinephrine auto-injectors should be made available. The authors state they have no conflicts of interest to declare. Protein kinase N1
“We describe a case of trichinellosis diagnosed at the Division of Infectious Diseases, Hospital of Lugano, in January 2009. This case was associated with a cluster of cases and was traced to the consumption of contaminated meat after a wild boar hunt in Bosnia. Trichinellosis is a zoonosis caused by nematodes of the genus Trichinella which show a cosmopolitan distribution. It is one of the most serious helminthiasis which still occur in humans in Europe.1 Infection in humans is caused by the ingestion of Trichinella spp. larvae encysted in muscle tissues of raw or undercooked meat or meat products (especially processed meat) of infected animals such as domestic and wild swine, horses, and bears.2 A 42-year-old male of Bosnian origin, who visited our Division of Infectious Diseases in January 20, 2009, complained of severe muscle pain and nonitchy rash.

05, 95% CI: 0004–01; 006, 95% CI: 00006–012) Retrospectivel

05, 95% CI: 0.004–0.1; 0.06, 95% CI: 0.0006–0.12). Retrospectively, terrorist attacks were perceived as a higher risk in Asia/Pacific than

in Africa (−0.05, 95% CI: −0.09 to −0.003), while malaria and general risk (not mosquitoes) were still considered as lower risks in Asia/Pacific than in Africa (0.06, 95% CI: 0.001–0.11; 0.05, 95% CI: 0.003–0.1). Post-travel risk perception was not different among gender, age groups, and travelers to Latin America versus Africa. The travelers’ overall perception of travel-associated health risks was mostly in accordance with the experts’ assessment and appears to be accurate for most risks, with the exception of accidents and STIs. Remarkably, all risks were perceived similarly or slightly lower after travel than before, except for accidents. Mosquitoes, selleck chemicals the number one perceived risk among travelers (before travel) and malaria, CHIR-99021 cost both “classic” pre-travel health topics, ranked highly among experts and travelers and were only

outranked by accidents. However, the tendency of having a lower post-travel risk perception was most distinct for malaria and mosquitoes (Figure 3). The interpretation of this finding remains ambiguous, as the associations with the term “mosquitoes” are unknown and might range from “nuisance” and local bite reactions to mosquito-borne diseases. This fact also applies to epidemic outbreaks which were rated as relatively low risk throughout. In general, destination-related differences in risk perception were small with the exception of malaria (Figures 3 and 4). In accordance with the prevalence of Plasmodium falciparum,[19] malaria was perceived as a lower risk in Asia/Pacific and Latin America than in Africa by both experts and travelers, confirming existing knowledge about the disease. The general risk of travel

was also considered lower in Asia/Pacific than in Africa. The popularity of travel to Asia/Pacific might lead to this region appearing less risky than other continents. However, terrorist attacks were perceived as a higher risk in Asia/Pacific than in Africa which might have been influenced by the relatively Phosphatidylinositol diacylglycerol-lyase high incidence of terrorist acts and political disturbances in Asia at the time of the study[20, 21] and their media coverage in Switzerland. This was estimated by the number of hits for the keywords “terror* asia*” compared to “terror* africa*”, “terror* south america*” and “terror* latin america*” between 1 January 2008 and 31 August 2009 on an archive portal for Swiss print media articles.[22] Regardless of their destinations, the travelers’ perception of VAEs was relatively high which is in accordance with European KAP studies describing negative attitudes toward vaccines and their potential adverse effects.

Gender appeared to influence the incidence of gastrointestinal ad

Gender appeared to influence the incidence of gastrointestinal adverse events and abnormal dreams/nightmares learn more for both treatments. Many effective and well-tolerated antiretroviral (ARV) regimens are now available for the

treatment of ARV-naïve HIV-1-infected individuals. However, several studies have demonstrated differences in response rates in various subpopulations. A lower response rate has been observed in women compared with men receiving either atazanavir/ritonavir or lopinavir/ritonavir in the CASTLE (BMS AI424138) study [1]. In other studies with protease inhibitor-based regimens, however, no significant gender differences in overall response rate or immunological response were observed with either lopinavir/ritonavir (study M05-730) or darunavir/ritonavir [AntiRetroviral therapy with TMC114 examined in naïve subjects (ARTEMIS)] [2, 3]. Similarly, no specific gender effects on efficacy have been reported for the nonnucleoside reverse transcriptase inhibitors (NNRTIs) efavirenz (EFV), nevirapine or etravirine [4-8]. A lower response rate and/or a higher virological failure rate has been observed in Black, compared with Asian or White, patients in multiple trials with a wide range of different

ARV regimens [3, 5, 9-13]. Such differences have been observed in NNRTI-based regimens, although two studies have reported www.selleckchem.com/products/pci-32765.html no significant effects of race on efficacy for nevirapine or EFV [5-7, 12]. While there are few reports of differences in safety or tolerability according to race, some important differences in safety profiles have been observed in women compared with men. Nevirapine has been associated with an increased risk of developing liver toxicity

in women with pretreatment CD4 cell count > 250 cells/μL, although in men hepatic toxicity has been associated with Mephenoxalone higher CD4 cell counts (> 400 cells/μL) [14-16]. Nausea has been reported more frequently in women than in men [1, 8, 17], while diarrhoea has generally been reported more frequently by men than women for a number of different ARV regimens. The once-daily (qd) NNRTI rilpivirine (RPV; TMC278) has been recently approved in the USA, Canada and Europe in combination with other ARVs, for use by HIV-1-infected treatment-naïve adult patients [18]. RPV has been approved for use both as a single-agent formulation (Edurant®, Janssen Pharmaceuticals, Inc., Titusville, NJ) and as a fixed-dose single-tablet regimen with tenofovir (TDF) and emtricitabine (FTC) (Complera®, Gilead Sciences International Limited, Cambridge, United Kingdom; Eviplera®, Gilead Sciences International Limited, Cambridge, United Kingdom) [18, 19].

, 1994;

, 1994; Selleckchem LDK378 Wenzel et al., 1996; Silverstein et al., 1997; Okusawa et al., 1998; Cohen & Abraham, 1999). The knowledge that stimulation by various Gram-positive pathogens, for example Group B streptococci (Gibson et al., 1991; Teti et al., 1992, 1993), viridans streptococci (Hanage & Cohen, 2002), Streptococcus pneumoniae (Benton et al., 1998), Streptococcus suis (Segura et al., 2006) and Staphylococcus aureus (Cui et al., 2000), generates a signal for elevated release of proinflammatory cytokines that are

correlated with disease severity and mortality (Metz & Murray, 1990; Wakabayashi et al., 1991; Casey et al., 1993) has highlighted some probable similarities in septic shock pathophysiology, leading to an increased research interest aiming to identify the counterpart of LPS, the pivotal molecule in Gram-negative sepsis. Despite great efforts, results are often inconclusive or contradictory. For example, while some works clearly suggest that purified type and/or group-specific GBS polysaccharides induce considerable TNF-α secretion,

(Vallejo et al., 1996; Cuzzola et al., 2000), in vivo data often do not support these results (Williams et al., 1993; Ling et al., 1995). Similar findings were described in the case of S. pneumoniae (Tuomanen et al., 1985). In view of the essential role of EPS in S. iniae pathogenesis, the belief that LTA is the unequivocal counterpart of LPS in terms of pathogenesis of Gram-positive bacteria (Ginsburg, 2002) should be reassessed, especially as other

studies have reported that check details staphylococcal and GBS LTA is a weak TNF-α inducer (Nealon & Mattingly, 1985; Vallejo et al., 1996; Han et al., 2003) and that pneumococcal LTA is completely unable to induce cytokine production (Bhakdi et al., 1991). Taken together, these data indicate that despite the fact that the possible disparity in results may be due to technical differences in the assay systems (cell types and culture conditions, variations in the chemical structures, for example CPS from different pathogens, or even minimal biochemical changes between Bacterial neuraminidase compounds considered similar, for example microheterogeneity among pneumococcal LTAs), the mechanisms underlying the septic shock induced by Gram-positive cocci are very likely heterogeneous. It appears that several of the cell wall components may act together or with other extracellular molecules, perhaps synergistically (Vallejo et al., 1996), to induce TNF-α production. While an in vitro cell-line system cannot completely mimic the complexity of the natural milieu, and therefore can hardly stand alone in witnessing the role of EPS, the addendum of in vivo data, also essentially supporting the concept of resemblance in the cytokine network triggered after stimulation by Gram-positive and Gram-negative microorganisms (but sustaining the theory of the absence of a common LPS-like denominator among Gram-positive pathogens), now indicates that, in the case of the disease induced by S.

DGGE was used to observe shifts in the Prevotella community as a

DGGE was used to observe shifts in the Prevotella community as a result of diet change. The analysis was carried out in a Bio-Rad DCode universal mutation detection system (Hercules, CA). The g-Prevo primers used for real-time PCR were used to amplify the

V5–V8 regions of the 16S rRNA gene of Prevotella. An amplicon of around 530 bp for DGGE analysis was obtained by modifying the forward primer by addition of a 40-bp GC clamp (5′-CGCCCGCCGCGCGCGGCGGGCGGGGCGGGGGCACGGGGGG-3′). Small molecule library order PCR was conducted using a GeneAmp PCR 2400 thermal cycler (Perkin-Elmer, Yokohama, Japan). A reaction mixture containing 20 pmol of each primer, 5 μL of 10 × ExTaq buffer, 10 pmol of each dNTP, 1.25 U polymerase (ExTaq, Takara, Otsu, Japan) and 10 ng of template DNA in a total volume of 50 μL was prepared. The temperature program for cycling consisted of an initial denaturation at 94 °C for 5 min, followed by 35 cycles of 94 °C for 30 s, annealing at 55 °C for 30 s and extension at 72 °C for 30 s with a final extension at 72 °C for 5 min. PCR-amplified 16S rRNA gene fragments were separated using an 8% polyacrylamide gel with 0.5 × TAE buffer (20 mM Tris-acetate, 10 mM sodium acetate, 0.5 mM EDTA, pH 8.0) and a 35–60% linear gradient of denaturant (100% denaturant corresponded to 40% v/v deionized formamide and 7 M urea). The gel was run at 60 °C, 80 V for 16 h, and then placed in fixing solution (10% ethanol and

0.5% acetic acid) for 2 h, stained in 0.1% w/v silver nitrate 2-hydroxyphytanoyl-CoA lyase solution for 20 min and developed in 1.5% sodium Ponatinib purchase hydroxide (w/v), 0.1% sodium borohydride (w/v) and 0.4% formaldehyde (v/v) for 8 min. Thereafter, the gel was rinsed and kept in distilled water till the image was scanned. Gel images were analyzed using bionumerics software version

4.5 (Applied Maths, Kortrijk, Belgium). Normalized banding patterns were used to generate dendrograms by calculating Dice’s similarity coefficient and using an unweighted pair group method with the arithmetic averages clustering algorithm. Two clone libraries were constructed for the respective feeding conditions from composite samples; the samples were obtained from rumen content DNA from three animals under the same dietary conditions. PCR products were generated by g-Prevo primers with the same reaction and amplification conditions as those described for DGGE, with the exception of the forward primer without a GC clamp. PCR products were cloned using a pGEM-T Easy Vector System (Promega, San Luis Obispo, CA) according to the manufacturer’s instructions. Clones containing the correct insert were sequenced at Takara Bio (Yokkaichi, Japan). Clone nomenclature was as follows: for the hay-associated Prevotella library, clone names begin with ‘HAPC’, followed by the clone number. Clone names in the concentrate-associated Prevotella library begin with ‘CAPC’, followed by the clone number.