Bacteria were routinely grown at 37 C in Lysogeny broth have ing carbenicillin or kanamycin or both antibiotics, respectively. For co expression of each, lipase and foldase, a culture from strain E. coli BL21 pAT LipBc, currently containing the plasmid encoding for lipase autotransporter fusion protein, was ready to ob tain electrocompetent cells in accordance to a modified proto col from Sambrook et al. Plasmid pAT FoldBc was then transformed into an aliquot of those cells by electro poration leading to strain BL21 pAT LiFoBc which contains each plasmids. Recombinant DNA methods For development of plasmid pAT LipBc, which has the gene encoding LipBc FP, the lipase gene was ampli fied by PCR. Plasmid pHES8 served like a template for primers EK009.
To facilitate cloning of your lipase PCR fragment to the autotransporter cassette, a XhoI restriction internet site was extra to the five finish as well as a KpnI restriction website was extra to the 3 finish by way of PCR. For development of plasmid pAT FoldBc, containing the gene which encodes for FoldBc FP, the sellckchem foldase gene was amplified by PCR, once more making use of pHES8 being a template for primers CD004. five XhoI and three KpnI restriciton internet sites have been connected towards the PCR fragment analogously. The two PCR goods were every inserted into vector pCR4 TOPO and very first brought to internet site directed muta genesis in accordance towards the protocols delivered by Strata gene to eliminate undesirable restriction internet sites inside the genes of interest. Mutated plasmids had been then limited with XhoI and KpnI. The restriction fragment containing the lipase gene was ligated into pET derivative pCD003 restricted with all the identical enzymes.
The restriction fragment containing the foldase gene was ligated into pCOLA DuetTM 1derivative pBL001 restricted together with the similar enzymes in advance of. The two ligation steps yielded an in frame fusion of lipase or foldase respectively, together with the autotransporter http://www.selleckchem.com/products/Trichostatin-A.html domains beneath the management of a T7lac promoter. Plasmid DNA planning, restriction digestion, ligation, DNA electrophoresis and transformation had been carried out in accordance to standard protocols. Gel ex traction of digested fragments was carried out using a gel extraction kit from Qiagen. Outer membrane protein planning E. coli cells had been grown overnight and 1 ml of your cul ture was made use of to inoculate LB medium. Cells were cultured at 37 C with vigorous shaking for about two hrs until an OD578 of 0.
5 was reached. The culture was separated into two aliquots and protein expression was induced by incorporating IPTG at a final con centration of one mM to a single of the aliquots. Cultures then had been incubated at 30 C and shaking for one hour. Induction was stopped by incubating the cells on ice for 15 min. Soon after harvesting and washing of your cells with Tris HCl, differential cell fraction ation was carried out in accordance towards the system of Hantke as modified by Schultheiss et al. In detail, cell lysis was obtained by adding lysozyme during the presence of 10 mM sacchar ose and 1 uM EDTA within a final volume of one. 5 mL of Tris HCl and incubation for 10 min at space temperature. Subsequently aprotinin, phenylmethylsulfonyl fluoride, likewise as 5 mL of extraction buffer and DNAseI had been added.
Right after incubation on ice for thirty min the samples have been centrifuged to get rid of intact bacteria and huge cell debris. The supernatants representing the clarified bacterial lysate were retained and centrifuged at greater pace so as to get the membrane protein fraction. The resulting supernatant, containing soluble cytoplasmic and periplasmic pro teins, was totally aspirated. The pellet was sus pended in 10 ml phosphate buffered saline plus 1% Sarcosyl and centrifuged once more. The super natant right after this phase contained the sarcosyl soluble cytoplasmic membrane proteins and was wholly aspirated.